Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 AC116562.4-201ENST00000641316 2276 ntBASIC23.7■■□□□ 1.38
ECHDC1Q9NTX5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 AC007952.6-201ENST00000573168 2673 ntBASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 AC003957.1-201ENST00000625108 2673 ntBASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 LINC01465-201ENST00000408887 1940 ntBASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 NIFKP9-201ENST00000419265 221 ntBASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 AL353807.1-201ENST00000427475 662 ntBASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.69■■□□□ 1.38
ECHDC1Q9NTX5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 AP002982.1-201ENST00000492365 877 ntBASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.68■■□□□ 1.38
ECHDC1Q9NTX5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 RPS2P4-201ENST00000476944 856 ntBASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 AL445675.2-201ENST00000620291 557 ntBASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
ECHDC1Q9NTX5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 AL135905.2-201ENST00000584934 1404 ntBASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 SDHAP1-207ENST00000440850 2000 ntBASIC23.66■■□□□ 1.38
ECHDC1Q9NTX5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms