Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 AC018470.1-201ENST00000624790 3129 ntBASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
SND1-IT1Q9HBX3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 LINC02228-203ENST00000641970 1355 ntBASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 AC097381.1-201ENST00000429019 1296 ntBASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 LTB4R2-202ENST00000528054 3092 ntBASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SND1-IT1Q9HBX3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CROCCP1-201ENST00000426910 5675 ntBASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 SUDS3P1-201ENST00000505831 966 ntBASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 AL356652.1-201ENST00000615962 565 ntBASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CROCCP3-202ENST00000420820 1947 ntBASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms