Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 AC027702.1-201ENST00000563810 1770 ntBASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 AC023632.3-201ENST00000521633 145 ntBASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 MIR6786-201ENST00000616843 113 ntBASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR1BQ9H9Y6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
POLR1BQ9H9Y6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR1BQ9H9Y6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 UNC93B2-201ENST00000285383 730 ntBASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 RBM17P1-201ENST00000453646 1190 ntBASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 AC004264.1-201ENST00000608354 794 ntBASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR1BQ9H9Y6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 PLK5-205ENST00000642079 1969 ntBASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.16■□□□□ 0.66
POLR1BQ9H9Y6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms