Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.53■□□□□ 0.56
PIF1Q9H611 MFSD11-216ENST00000590393 1141 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 AC105020.6-201ENST00000621523 1217 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.52■□□□□ 0.56
PIF1Q9H611 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.52■□□□□ 0.56
PIF1Q9H611 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.52■□□□□ 0.56
PIF1Q9H611 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 AC007322.4-201ENST00000509611 723 ntBASIC18.52■□□□□ 0.56
PIF1Q9H611 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.52■□□□□ 0.56
PIF1Q9H611 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PIF1Q9H611 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PIF1Q9H611 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.52■□□□□ 0.55
PIF1Q9H611 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PIF1Q9H611 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PIF1Q9H611 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PIF1Q9H611 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
PIF1Q9H611 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.52■□□□□ 0.55
PIF1Q9H611 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.55
PIF1Q9H611 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PIF1Q9H611 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 BID-214ENST00000617586 542 ntTSL 5 BASIC18.51■□□□□ 0.55
PIF1Q9H611 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PIF1Q9H611 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PIF1Q9H611 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.51■□□□□ 0.55
PIF1Q9H611 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 AC026471.1-201ENST00000564629 3026 ntBASIC18.51■□□□□ 0.55
PIF1Q9H611 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PIF1Q9H611 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PIF1Q9H611 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PIF1Q9H611 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
PIF1Q9H611 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.5■□□□□ 0.55
PIF1Q9H611 AL161938.1-201ENST00000569833 2180 ntBASIC18.5■□□□□ 0.55
PIF1Q9H611 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.5■□□□□ 0.55
PIF1Q9H611 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PIF1Q9H611 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
PIF1Q9H611 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.5■□□□□ 0.55
PIF1Q9H611 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
PIF1Q9H611 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.5■□□□□ 0.55
PIF1Q9H611 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms