Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 AC116351.2-201ENST00000606540 1585 ntBASIC17.99■□□□□ 0.47
UBQLN3Q9H347 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 AL020996.1-203ENST00000536896 2307 ntBASIC17.99■□□□□ 0.47
UBQLN3Q9H347 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 AP000974.1-201ENST00000623909 2387 ntBASIC17.98■□□□□ 0.47
UBQLN3Q9H347 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 NBPF21P-201ENST00000425093 1451 ntBASIC17.98■□□□□ 0.47
UBQLN3Q9H347 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN3Q9H347 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 MIR718-201ENST00000390190 70 ntBASIC17.97■□□□□ 0.47
UBQLN3Q9H347 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 Z99916.2-201ENST00000604037 246 ntBASIC17.97■□□□□ 0.47
UBQLN3Q9H347 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN3Q9H347 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 RARRES2P10-201ENST00000564312 460 ntBASIC17.96■□□□□ 0.47
UBQLN3Q9H347 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN3Q9H347 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.96■□□□□ 0.46
UBQLN3Q9H347 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN3Q9H347 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.96■□□□□ 0.46
UBQLN3Q9H347 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN3Q9H347 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 PHGDH-210ENST00000641115 1638 ntBASIC17.95■□□□□ 0.46
UBQLN3Q9H347 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC012618.2-201ENST00000428058 849 ntBASIC17.95■□□□□ 0.46
UBQLN3Q9H347 KRT16P5-201ENST00000455284 522 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms