Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 RPS2P55-201ENST00000397318 883 ntBASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 AC107956.1-201ENST00000494359 873 ntBASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 AL353708.3-201ENST00000610272 989 ntBASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCM2Q9BSQ5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 AP002982.1-201ENST00000492365 877 ntBASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 AF186192.3-201ENST00000583427 947 ntBASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2Q9BSQ5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 RPS2P4-201ENST00000476944 856 ntBASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 AC233702.5-201ENST00000584107 538 ntBASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2Q9BSQ5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms