Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NPAS1Q99742 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.7■□□□□ 0.42
NPAS1Q99742 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.7■□□□□ 0.42
NPAS1Q99742 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.7■□□□□ 0.42
NPAS1Q99742 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.7■□□□□ 0.42
NPAS1Q99742 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
NPAS1Q99742 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.7■□□□□ 0.42
NPAS1Q99742 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.7■□□□□ 0.42
NPAS1Q99742 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPAS1Q99742 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
NPAS1Q99742 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.69■□□□□ 0.42
NPAS1Q99742 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NPAS1Q99742 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.69■□□□□ 0.42
NPAS1Q99742 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS1Q99742 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NPAS1Q99742 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 TUBB8P6-201ENST00000436895 1288 ntBASIC17.68■□□□□ 0.42
NPAS1Q99742 KRT16P5-201ENST00000455284 522 ntBASIC17.68■□□□□ 0.42
NPAS1Q99742 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS1Q99742 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.68■□□□□ 0.42
NPAS1Q99742 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NPAS1Q99742 LINC01465-201ENST00000408887 1940 ntBASIC17.68■□□□□ 0.42
NPAS1Q99742 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS1Q99742 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
NPAS1Q99742 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS1Q99742 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NPAS1Q99742 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS1Q99742 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS1Q99742 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NPAS1Q99742 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NPAS1Q99742 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS1Q99742 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS1Q99742 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS1Q99742 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS1Q99742 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NPAS1Q99742 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS1Q99742 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NPAS1Q99742 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms