Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIGMAR1Q99720 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 AC090877.2-201ENST00000558441 1738 ntBASIC13.02□□□□□ -0.33
SIGMAR1Q99720 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SIGMAR1Q99720 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 AC005052.1-201ENST00000625181 2492 ntBASIC13.01□□□□□ -0.33
SIGMAR1Q99720 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 GFER-205ENST00000569451 517 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 AC018755.3-202ENST00000596210 929 ntBASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIGMAR1Q99720 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13□□□□□ -0.33
SIGMAR1Q99720 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SIGMAR1Q99720 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SIGMAR1Q99720 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 AC104564.3-201ENST00000582367 638 ntBASIC13□□□□□ -0.33
SIGMAR1Q99720 RAP2CP1-202ENST00000605179 643 ntBASIC13□□□□□ -0.33
SIGMAR1Q99720 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SIGMAR1Q99720 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SIGMAR1Q99720 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13□□□□□ -0.33
SIGMAR1Q99720 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms