Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 AC007322.3-201ENST00000426526 701 ntBASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 KRT87P-202ENST00000534226 1464 ntBASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 AC093525.10-201ENST00000625130 1569 ntBASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP6Q96FZ7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP6Q96FZ7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.52■□□□□ 0.71
CHMP6Q96FZ7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 AC141586.3-201ENST00000562166 1838 ntBASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 ZNRF2P3-201ENST00000424200 374 ntBASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 AC138907.5-202ENST00000569484 235 ntBASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP6Q96FZ7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 KRT16P6-202ENST00000425692 1426 ntBASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP6Q96FZ7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms