Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC127Q96BQ5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCDC127Q96BQ5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC127Q96BQ5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC127Q96BQ5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 AC116562.4-201ENST00000641316 2276 ntBASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 AC093484.2-201ENST00000580996 2166 ntBASIC21.12■□□□□ 0.97
CCDC127Q96BQ5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC127Q96BQ5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC127Q96BQ5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC127Q96BQ5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC127Q96BQ5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms