Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VPS33AQ96AX1 CROCCP3-202ENST00000420820 1947 ntBASIC18.64■□□□□ 0.58
VPS33AQ96AX1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS33AQ96AX1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
VPS33AQ96AX1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS33AQ96AX1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 AL138781.2-201ENST00000617896 1843 ntBASIC18.63■□□□□ 0.57
VPS33AQ96AX1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 AC090340.1-201ENST00000620778 4980 ntBASIC18.63■□□□□ 0.57
VPS33AQ96AX1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS33AQ96AX1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 AC093787.1-201ENST00000450396 207 ntBASIC18.62■□□□□ 0.57
VPS33AQ96AX1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS33AQ96AX1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 TEX21P-204ENST00000641479 1693 ntBASIC18.61■□□□□ 0.57
VPS33AQ96AX1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
VPS33AQ96AX1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms