Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 AC124016.1-201ENST00000609552 612 ntBASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFBP1Q8NEF9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFBP1Q8NEF9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRFBP1Q8NEF9 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 C1QBPP2-201ENST00000528754 825 ntBASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFBP1Q8NEF9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.5■□□□□ 0.55
SRFBP1Q8NEF9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms