Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TERF1P5-201ENST00000477545 1207 ntBASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC71LQ8N9Z2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 YBX1P1-201ENST00000445822 960 ntBASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 KRT18P14-201ENST00000534205 1250 ntBASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 AL161938.1-201ENST00000569833 2180 ntBASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC71LQ8N9Z2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 AC100791.3-201ENST00000617619 330 ntBASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC71LQ8N9Z2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
CCDC71LQ8N9Z2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 AL139246.5-201ENST00000606645 996 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms