Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.13■□□□□ 0.33
DTX3Q8N9I9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DTX3Q8N9I9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DTX3Q8N9I9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 SLC7A5P2-201ENST00000553010 536 ntBASIC17.1■□□□□ 0.33
DTX3Q8N9I9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 KRT16P2-201ENST00000414673 1423 ntBASIC17.1■□□□□ 0.33
DTX3Q8N9I9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.1■□□□□ 0.33
DTX3Q8N9I9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DTX3Q8N9I9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms