Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 AC004911.1-201ENST00000416316 871 ntBASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL1Q8N7R7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 AC116351.2-201ENST00000606540 1585 ntBASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 GPX1P1-201ENST00000388829 606 ntBASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 AL162430.1-201ENST00000480705 870 ntBASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL1Q8N7R7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CCNYL1Q8N7R7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CCNYL1Q8N7R7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms