Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 KRT18P68-201ENST00000392293 1000 ntBASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 AC091874.3-201ENST00000512672 1195 ntBASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 MYC-209ENST00000641252 345 ntBASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.22■□□□□ 0.67
EFCAB3Q8N7B9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 AC105020.6-201ENST00000621523 1217 ntBASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCAB3Q8N7B9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 Z82202.1-201ENST00000623446 1880 ntBASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 BX119927.1-201ENST00000636596 1552 ntBASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 AC026366.1-201ENST00000488803 879 ntBASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 BNIP3P41-202ENST00000616656 861 ntBASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCAB3Q8N7B9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 AL589743.5-201ENST00000616611 1050 ntBASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms