Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 AC069236.1-201ENST00000604339 616 ntBASIC21.6■■□□□ 1.05
DHX40Q8IX18 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.6■■□□□ 1.05
DHX40Q8IX18 WIZP1-201ENST00000531444 2299 ntBASIC21.6■■□□□ 1.05
DHX40Q8IX18 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DHX40Q8IX18 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.6■■□□□ 1.05
DHX40Q8IX18 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 AC135050.7-201ENST00000624508 2218 ntBASIC21.59■■□□□ 1.05
DHX40Q8IX18 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.59■■□□□ 1.05
DHX40Q8IX18 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DHX40Q8IX18 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 AC093525.10-201ENST00000625130 1569 ntBASIC21.58■■□□□ 1.05
DHX40Q8IX18 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 HLA-L-209ENST00000420110 1011 ntBASIC21.58■■□□□ 1.05
DHX40Q8IX18 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.58■■□□□ 1.05
DHX40Q8IX18 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DHX40Q8IX18 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.58■■□□□ 1.04
DHX40Q8IX18 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.58■■□□□ 1.04
DHX40Q8IX18 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DHX40Q8IX18 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.58■■□□□ 1.04
DHX40Q8IX18 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
DHX40Q8IX18 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.58■■□□□ 1.04
DHX40Q8IX18 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DHX40Q8IX18 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
DHX40Q8IX18 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 AC120498.9-201ENST00000339021 3867 ntBASIC21.57■■□□□ 1.04
DHX40Q8IX18 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 CROCCP5-201ENST00000436658 830 ntBASIC21.57■■□□□ 1.04
DHX40Q8IX18 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DHX40Q8IX18 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.57■■□□□ 1.04
DHX40Q8IX18 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHX40Q8IX18 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHX40Q8IX18 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DHX40Q8IX18 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 AC006970.2-201ENST00000450065 779 ntBASIC21.56■■□□□ 1.04
DHX40Q8IX18 AC093787.1-201ENST00000450396 207 ntBASIC21.56■■□□□ 1.04
DHX40Q8IX18 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.56■■□□□ 1.04
DHX40Q8IX18 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DHX40Q8IX18 AL390961.4-201ENST00000623958 2535 ntBASIC21.56■■□□□ 1.04
DHX40Q8IX18 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms