Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.2■□□□□ 0.66
APLFQ8IW19 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
APLFQ8IW19 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APLFQ8IW19 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.19■□□□□ 0.66
APLFQ8IW19 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
APLFQ8IW19 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.19■□□□□ 0.66
APLFQ8IW19 RPPH1-201ENST00000516869 333 ntBASIC19.19■□□□□ 0.66
APLFQ8IW19 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.19■□□□□ 0.66
APLFQ8IW19 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.19■□□□□ 0.66
APLFQ8IW19 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.19■□□□□ 0.66
APLFQ8IW19 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
APLFQ8IW19 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.19■□□□□ 0.66
APLFQ8IW19 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
APLFQ8IW19 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 AC092368.3-202ENST00000574180 1591 ntBASIC19.19■□□□□ 0.66
APLFQ8IW19 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.19■□□□□ 0.66
APLFQ8IW19 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APLFQ8IW19 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
APLFQ8IW19 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.18■□□□□ 0.66
APLFQ8IW19 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
APLFQ8IW19 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
APLFQ8IW19 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.18■□□□□ 0.66
APLFQ8IW19 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 AC007322.3-201ENST00000426526 701 ntBASIC19.18■□□□□ 0.66
APLFQ8IW19 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.18■□□□□ 0.66
APLFQ8IW19 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.18■□□□□ 0.66
APLFQ8IW19 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.18■□□□□ 0.66
APLFQ8IW19 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.18■□□□□ 0.66
APLFQ8IW19 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
APLFQ8IW19 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.18■□□□□ 0.66
APLFQ8IW19 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APLFQ8IW19 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
APLFQ8IW19 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
APLFQ8IW19 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
APLFQ8IW19 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
APLFQ8IW19 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 RN7SL471P-201ENST00000580476 299 ntBASIC19.17■□□□□ 0.66
APLFQ8IW19 FAM197Y4-202ENST00000622692 608 ntBASIC19.17■□□□□ 0.66
APLFQ8IW19 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
APLFQ8IW19 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.17■□□□□ 0.66
APLFQ8IW19 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APLFQ8IW19 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
APLFQ8IW19 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APLFQ8IW19 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.16■□□□□ 0.66
APLFQ8IW19 C1QBPP2-201ENST00000528754 825 ntBASIC19.16■□□□□ 0.66
APLFQ8IW19 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APLFQ8IW19 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APLFQ8IW19 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms