Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 ESPNP-201ENST00000270691 2015 ntBASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 POU5F1P4-201ENST00000413175 1085 ntBASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 AC084018.2-201ENST00000613093 2607 ntBASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 KRT8P36-201ENST00000489121 1440 ntBASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 AC090340.1-201ENST00000620778 4980 ntBASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD2Q8IV50 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 AC131281.2-201ENST00000520478 145 ntBASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD2Q8IV50 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 LINC00896-202ENST00000609602 2128 ntBASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD2Q8IV50 AC008175.2-201ENST00000612840 297 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms