Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 MCRIP2P1-201ENST00000394346 511 ntBASIC13.86□□□□□ -0.19
NFE4Q86UQ8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 PGM5P4-201ENST00000421970 445 ntBASIC13.86□□□□□ -0.19
NFE4Q86UQ8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 AC093787.1-201ENST00000450396 207 ntBASIC13.86□□□□□ -0.19
NFE4Q86UQ8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 AL589743.5-201ENST00000616611 1050 ntBASIC13.86□□□□□ -0.19
NFE4Q86UQ8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NFE4Q86UQ8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 DPP3P2-201ENST00000416030 1696 ntBASIC13.85□□□□□ -0.19
NFE4Q86UQ8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.85□□□□□ -0.19
NFE4Q86UQ8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NFE4Q86UQ8 AC116050.2-201ENST00000612102 1779 ntBASIC13.84□□□□□ -0.19
NFE4Q86UQ8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms