Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD3Q7Z3D4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD3Q7Z3D4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD3Q7Z3D4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 HTR7P1-201ENST00000538670 1336 ntBASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.51■□□□□ 0.71
LYSMD3Q7Z3D4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD3Q7Z3D4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms