Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
LCA10Q71F78 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.46□□□□□ -0.74
LCA10Q71F78 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC10.46□□□□□ -0.74
LCA10Q71F78 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
LCA10Q71F78 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LCA10Q71F78 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LCA10Q71F78 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
LCA10Q71F78 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC10.45□□□□□ -0.74
LCA10Q71F78 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.45□□□□□ -0.74
LCA10Q71F78 MIR3621-201ENST00000580529 85 ntBASIC10.45□□□□□ -0.74
LCA10Q71F78 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 RASSF1-AS1-201ENST00000629828 790 ntBASIC10.45□□□□□ -0.74
LCA10Q71F78 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.45□□□□□ -0.74
LCA10Q71F78 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.45□□□□□ -0.74
LCA10Q71F78 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LCA10Q71F78 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.44□□□□□ -0.74
LCA10Q71F78 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.44□□□□□ -0.74
LCA10Q71F78 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LCA10Q71F78 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 AC067852.2-201ENST00000590513 2313 ntBASIC10.44□□□□□ -0.74
LCA10Q71F78 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.44□□□□□ -0.74
LCA10Q71F78 PTCHD3P2-201ENST00000424937 1205 ntBASIC10.44□□□□□ -0.74
LCA10Q71F78 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LCA10Q71F78 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC10.44□□□□□ -0.74
LCA10Q71F78 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC10.44□□□□□ -0.74
LCA10Q71F78 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LCA10Q71F78 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms