Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 COX11P1-201ENST00000489116 835 ntBASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC149Q6ZUS6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 TSPY5P-201ENST00000426936 936 ntBASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 KRT18P56-201ENST00000507275 550 ntBASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 AP000550.4-202ENST00000639755 178 ntBASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC149Q6ZUS6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 TSPY17P-201ENST00000450329 467 ntBASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC149Q6ZUS6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 AC007663.1-201ENST00000438948 1240 ntBASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC149Q6ZUS6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC149Q6ZUS6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 AC092338.2-201ENST00000568827 1415 ntBASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 AL512604.3-201ENST00000569583 964 ntBASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC149Q6ZUS6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC149Q6ZUS6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC149Q6ZUS6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC149Q6ZUS6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC149Q6ZUS6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms