Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 AC073111.5-205ENST00000641717 521 ntBASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP6AP1LQ52LC2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 AC073210.2-201ENST00000430369 194 ntBASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
ATP6AP1LQ52LC2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 AC005829.2-201ENST00000571422 1056 ntBASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP6AP1LQ52LC2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 AL050303.2-201ENST00000619798 666 ntBASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6AP1LQ52LC2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6AP1LQ52LC2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATP6AP1LQ52LC2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6AP1LQ52LC2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP6AP1LQ52LC2 AL161938.1-201ENST00000569833 2180 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms