Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN12P56749 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLDN12P56749 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 HLA-G-202ENST00000376815 851 ntBASIC16.88■□□□□ 0.29
CLDN12P56749 HLA-G-203ENST00000376818 1127 ntBASIC16.88■□□□□ 0.29
CLDN12P56749 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN12P56749 AC005837.3-201ENST00000612163 286 ntBASIC16.88■□□□□ 0.29
CLDN12P56749 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN12P56749 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN12P56749 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN12P56749 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CLDN12P56749 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN12P56749 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.87■□□□□ 0.29
CLDN12P56749 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLDN12P56749 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN12P56749 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN12P56749 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CLDN12P56749 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN12P56749 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CLDN12P56749 AL133373.2-201ENST00000623187 2828 ntBASIC16.86■□□□□ 0.29
CLDN12P56749 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN12P56749 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLDN12P56749 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN12P56749 FZD10-202ENST00000539839 3282 ntBASIC16.86■□□□□ 0.29
CLDN12P56749 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CLDN12P56749 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN12P56749 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN12P56749 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN12P56749 AL390961.4-201ENST00000623958 2535 ntBASIC16.86■□□□□ 0.29
CLDN12P56749 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN12P56749 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN12P56749 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN12P56749 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms