Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PER3P56645 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.95■□□□□ 0.46
PER3P56645 AL031963.3-201ENST00000606441 850 ntBASIC17.95■□□□□ 0.46
PER3P56645 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 KRT8P36-201ENST00000489121 1440 ntBASIC17.95■□□□□ 0.46
PER3P56645 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PER3P56645 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PER3P56645 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.94■□□□□ 0.46
PER3P56645 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PER3P56645 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 AC005521.1-201ENST00000393351 872 ntBASIC17.94■□□□□ 0.46
PER3P56645 AC113347.1-201ENST00000413321 391 ntBASIC17.94■□□□□ 0.46
PER3P56645 AP002982.1-201ENST00000492365 877 ntBASIC17.94■□□□□ 0.46
PER3P56645 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.94■□□□□ 0.46
PER3P56645 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.94■□□□□ 0.46
PER3P56645 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PER3P56645 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 SMG8-203ENST00000578922 2178 ntBASIC17.94■□□□□ 0.46
PER3P56645 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
PER3P56645 KRT18P22-201ENST00000402024 1347 ntBASIC17.94■□□□□ 0.46
PER3P56645 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PER3P56645 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.94■□□□□ 0.46
PER3P56645 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PER3P56645 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 LINC01568-207ENST00000641790 1380 ntBASIC17.93■□□□□ 0.46
PER3P56645 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PER3P56645 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 PCDHAC2-203ENST00000615316 3011 ntBASIC17.93■□□□□ 0.46
PER3P56645 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 AL137013.1-201ENST00000432946 1228 ntBASIC17.93■□□□□ 0.46
PER3P56645 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.93■□□□□ 0.46
PER3P56645 NUDT16P1-203ENST00000513809 620 ntBASIC17.93■□□□□ 0.46
PER3P56645 NAPSB-206ENST00000562112 1266 ntBASIC17.93■□□□□ 0.46
PER3P56645 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.93■□□□□ 0.46
PER3P56645 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.93■□□□□ 0.46
PER3P56645 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.93■□□□□ 0.46
PER3P56645 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PER3P56645 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PER3P56645 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PER3P56645 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 RBM17P1-201ENST00000453646 1190 ntBASIC17.92■□□□□ 0.46
PER3P56645 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
PER3P56645 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.92■□□□□ 0.46
PER3P56645 AL121906.2-201ENST00000621597 723 ntBASIC17.92■□□□□ 0.46
PER3P56645 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PER3P56645 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PER3P56645 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms