Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.93■□□□□ 0.78
ITGA8P53708 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
ITGA8P53708 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.93■□□□□ 0.78
ITGA8P53708 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
ITGA8P53708 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.93■□□□□ 0.78
ITGA8P53708 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ITGA8P53708 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ITGA8P53708 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ITGA8P53708 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.92■□□□□ 0.78
ITGA8P53708 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.92■□□□□ 0.78
ITGA8P53708 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 IKBKGP1-201ENST00000612193 1073 ntBASIC19.92■□□□□ 0.78
ITGA8P53708 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.92■□□□□ 0.78
ITGA8P53708 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
ITGA8P53708 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITGA8P53708 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
ITGA8P53708 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ITGA8P53708 LSM12P1-201ENST00000411836 588 ntBASIC19.91■□□□□ 0.78
ITGA8P53708 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
ITGA8P53708 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.91■□□□□ 0.78
ITGA8P53708 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.91■□□□□ 0.78
ITGA8P53708 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ITGA8P53708 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ITGA8P53708 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
ITGA8P53708 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
ITGA8P53708 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ITGA8P53708 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.9■□□□□ 0.78
ITGA8P53708 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.9■□□□□ 0.78
ITGA8P53708 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ITGA8P53708 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.9■□□□□ 0.78
ITGA8P53708 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 AC104581.1-202ENST00000635932 2618 ntBASIC19.9■□□□□ 0.78
ITGA8P53708 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ITGA8P53708 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.9■□□□□ 0.78
ITGA8P53708 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.9■□□□□ 0.78
ITGA8P53708 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ITGA8P53708 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ITGA8P53708 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
ITGA8P53708 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ITGA8P53708 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ITGA8P53708 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ITGA8P53708 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.89■□□□□ 0.77
ITGA8P53708 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ITGA8P53708 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ITGA8P53708 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.89■□□□□ 0.77
ITGA8P53708 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.89■□□□□ 0.77
ITGA8P53708 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ITGA8P53708 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.89■□□□□ 0.77
ITGA8P53708 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ITGA8P53708 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.89■□□□□ 0.77
ITGA8P53708 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.89■□□□□ 0.77
ITGA8P53708 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.89■□□□□ 0.77
ITGA8P53708 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.89■□□□□ 0.77
ITGA8P53708 AC005181.1-201ENST00000604782 1256 ntBASIC19.89■□□□□ 0.77
ITGA8P53708 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.89■□□□□ 0.77
ITGA8P53708 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ITGA8P53708 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ITGA8P53708 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ITGA8P53708 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ITGA8P53708 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ITGA8P53708 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms