Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDX1P52945 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.87■□□□□ 0.61
PDX1P52945 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.87■□□□□ 0.61
PDX1P52945 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.87■□□□□ 0.61
PDX1P52945 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.87■□□□□ 0.61
PDX1P52945 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.87■□□□□ 0.61
PDX1P52945 AC018553.1-201ENST00000616682 1458 ntBASIC18.87■□□□□ 0.61
PDX1P52945 AC006011.2-201ENST00000621313 1158 ntBASIC18.87■□□□□ 0.61
PDX1P52945 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 PCDHAC2-203ENST00000615316 3011 ntBASIC18.87■□□□□ 0.61
PDX1P52945 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDX1P52945 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PDX1P52945 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.86■□□□□ 0.61
PDX1P52945 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.86■□□□□ 0.61
PDX1P52945 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDX1P52945 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.86■□□□□ 0.61
PDX1P52945 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDX1P52945 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDX1P52945 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.85■□□□□ 0.61
PDX1P52945 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.85■□□□□ 0.61
PDX1P52945 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 TSPY14P-201ENST00000303979 915 ntBASIC18.85■□□□□ 0.61
PDX1P52945 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDX1P52945 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.85■□□□□ 0.61
PDX1P52945 NTF6B-201ENST00000591913 560 ntBASIC18.85■□□□□ 0.61
PDX1P52945 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.85■□□□□ 0.61
PDX1P52945 AC112907.3-201ENST00000577781 2400 ntBASIC18.85■□□□□ 0.61
PDX1P52945 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.85■□□□□ 0.61
PDX1P52945 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDX1P52945 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.85■□□□□ 0.61
PDX1P52945 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.84■□□□□ 0.61
PDX1P52945 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.84■□□□□ 0.61
PDX1P52945 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDX1P52945 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDX1P52945 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 C2orf69P3-201ENST00000565542 1120 ntBASIC18.84■□□□□ 0.61
PDX1P52945 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.84■□□□□ 0.61
PDX1P52945 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.84■□□□□ 0.61
PDX1P52945 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 AC099778.1-201ENST00000568593 1911 ntBASIC18.84■□□□□ 0.61
PDX1P52945 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDX1P52945 SMG8-203ENST00000578922 2178 ntBASIC18.83■□□□□ 0.61
PDX1P52945 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PDX1P52945 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.83■□□□□ 0.61
PDX1P52945 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDX1P52945 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDX1P52945 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.83■□□□□ 0.61
PDX1P52945 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDX1P52945 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDX1P52945 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDX1P52945 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PDX1P52945 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDX1P52945 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.83■□□□□ 0.6
PDX1P52945 INGX-201ENST00000359239 846 ntBASIC18.83■□□□□ 0.6
PDX1P52945 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDX1P52945 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms