Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
GTF2A1P52655 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GTF2A1P52655 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.06■□□□□ 0.64
GTF2A1P52655 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
GTF2A1P52655 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
GTF2A1P52655 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF2A1P52655 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 AC012354.3-201ENST00000623734 483 ntBASIC19.05■□□□□ 0.64
GTF2A1P52655 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF2A1P52655 WIZP1-201ENST00000531444 2299 ntBASIC19.05■□□□□ 0.64
GTF2A1P52655 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
GTF2A1P52655 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF2A1P52655 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
GTF2A1P52655 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
GTF2A1P52655 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF2A1P52655 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GTF2A1P52655 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.04■□□□□ 0.64
GTF2A1P52655 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF2A1P52655 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GTF2A1P52655 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GTF2A1P52655 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
GTF2A1P52655 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF2A1P52655 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF2A1P52655 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
GTF2A1P52655 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GTF2A1P52655 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
GTF2A1P52655 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF2A1P52655 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 AC092850.2-201ENST00000623821 2697 ntBASIC19.03■□□□□ 0.64
GTF2A1P52655 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF2A1P52655 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GTF2A1P52655 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
GTF2A1P52655 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
GTF2A1P52655 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.02■□□□□ 0.64
GTF2A1P52655 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF2A1P52655 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
GTF2A1P52655 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GTF2A1P52655 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF2A1P52655 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF2A1P52655 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
GTF2A1P52655 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF2A1P52655 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF2A1P52655 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.02■□□□□ 0.63
GTF2A1P52655 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GTF2A1P52655 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
GTF2A1P52655 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2A1P52655 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2A1P52655 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms