Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 TNXA-203ENST00000507684 2038 ntBASIC17.06■□□□□ 0.32
CX3CR1P49238 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 AC098934.4-201ENST00000564127 592 ntBASIC17.06■□□□□ 0.32
CX3CR1P49238 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.06■□□□□ 0.32
CX3CR1P49238 AL109923.1-201ENST00000618799 583 ntBASIC17.06■□□□□ 0.32
CX3CR1P49238 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
CX3CR1P49238 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CX3CR1P49238 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CX3CR1P49238 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.05■□□□□ 0.32
CX3CR1P49238 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.05■□□□□ 0.32
CX3CR1P49238 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.05■□□□□ 0.32
CX3CR1P49238 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.05■□□□□ 0.32
CX3CR1P49238 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.05■□□□□ 0.32
CX3CR1P49238 AC060766.5-201ENST00000590539 871 ntBASIC17.05■□□□□ 0.32
CX3CR1P49238 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.05■□□□□ 0.32
CX3CR1P49238 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CX3CR1P49238 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CX3CR1P49238 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
CX3CR1P49238 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.04■□□□□ 0.32
CX3CR1P49238 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.04■□□□□ 0.32
CX3CR1P49238 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.04■□□□□ 0.32
CX3CR1P49238 PNMA6B-201ENST00000538162 1200 ntBASIC17.04■□□□□ 0.32
CX3CR1P49238 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 AL121906.2-201ENST00000621597 723 ntBASIC17.04■□□□□ 0.32
CX3CR1P49238 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 AP000974.1-201ENST00000623909 2387 ntBASIC17.04■□□□□ 0.32
CX3CR1P49238 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.04■□□□□ 0.32
CX3CR1P49238 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CR1P49238 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CX3CR1P49238 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CR1P49238 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
CX3CR1P49238 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CX3CR1P49238 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CX3CR1P49238 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CR1P49238 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms