Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC6A12P48065 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A12P48065 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A12P48065 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A12P48065 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 AC004264.1-201ENST00000608354 794 ntBASIC18.76■□□□□ 0.59
SLC6A12P48065 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC6A12P48065 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A12P48065 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC6A12P48065 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC6A12P48065 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC6A12P48065 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 KRASP1-201ENST00000407852 552 ntBASIC18.75■□□□□ 0.59
SLC6A12P48065 AC239809.2-201ENST00000415381 517 ntBASIC18.75■□□□□ 0.59
SLC6A12P48065 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC6A12P48065 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SLC6A12P48065 RN7SL471P-201ENST00000580476 299 ntBASIC18.75■□□□□ 0.59
SLC6A12P48065 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC6A12P48065 AC006058.3-201ENST00000606217 1069 ntBASIC18.75■□□□□ 0.59
SLC6A12P48065 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A12P48065 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC6A12P48065 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC6A12P48065 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A12P48065 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC6A12P48065 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC6A12P48065 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC6A12P48065 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A12P48065 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 POU5F1P3-201ENST00000428824 1078 ntBASIC18.74■□□□□ 0.59
SLC6A12P48065 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 AC133681.1-201ENST00000465482 601 ntBASIC18.74■□□□□ 0.59
SLC6A12P48065 AC124016.1-201ENST00000609552 612 ntBASIC18.74■□□□□ 0.59
SLC6A12P48065 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A12P48065 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
SLC6A12P48065 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC6A12P48065 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A12P48065 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A12P48065 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 AC098818.2-201ENST00000564925 2320 ntBASIC18.73■□□□□ 0.59
SLC6A12P48065 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A12P48065 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 AC128676.1-201ENST00000454392 318 ntBASIC18.73■□□□□ 0.59
SLC6A12P48065 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.73■□□□□ 0.59
SLC6A12P48065 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 HLA-A-209ENST00000638375 975 ntBASIC18.73■□□□□ 0.59
SLC6A12P48065 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC6A12P48065 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms