Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.23■□□□□ 0.99
KRT9P35527 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.23■□□□□ 0.99
KRT9P35527 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.23■□□□□ 0.99
KRT9P35527 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 AC091874.3-201ENST00000512672 1195 ntBASIC21.23■□□□□ 0.99
KRT9P35527 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
KRT9P35527 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT9P35527 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT9P35527 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT9P35527 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
KRT9P35527 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 AC018553.1-201ENST00000616682 1458 ntBASIC21.22■□□□□ 0.99
KRT9P35527 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
KRT9P35527 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT9P35527 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT9P35527 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
KRT9P35527 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT9P35527 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT9P35527 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT9P35527 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT9P35527 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT9P35527 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 AC097658.1-201ENST00000475555 843 ntBASIC21.21■□□□□ 0.99
KRT9P35527 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT9P35527 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT9P35527 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT9P35527 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
KRT9P35527 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT9P35527 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KRT9P35527 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT9P35527 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT9P35527 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KRT9P35527 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRT9P35527 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRT9P35527 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
KRT9P35527 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.2■□□□□ 0.98
KRT9P35527 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.2■□□□□ 0.98
KRT9P35527 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.2■□□□□ 0.98
KRT9P35527 AL138781.1-201ENST00000566567 1274 ntBASIC21.2■□□□□ 0.98
KRT9P35527 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KRT9P35527 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT9P35527 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KRT9P35527 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT9P35527 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 AL138781.2-201ENST00000617896 1843 ntBASIC21.2■□□□□ 0.98
KRT9P35527 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT9P35527 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
KRT9P35527 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
KRT9P35527 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT9P35527 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
KRT9P35527 AL161938.1-201ENST00000569833 2180 ntBASIC21.19■□□□□ 0.98
KRT9P35527 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRT9P35527 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT9P35527 AC104771.1-201ENST00000603335 964 ntBASIC21.19■□□□□ 0.98
KRT9P35527 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.19■□□□□ 0.98
KRT9P35527 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT9P35527 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KRT9P35527 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 CROCCP3-202ENST00000420820 1947 ntBASIC21.19■□□□□ 0.98
KRT9P35527 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT9P35527 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT9P35527 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KRT9P35527 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT9P35527 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms