Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 EML3-216ENST00000529309 2909 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN1P35523 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCN1P35523 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
CLCN1P35523 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CLCN1P35523 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CLCN1P35523 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.04■■□□□ 1.12
CLCN1P35523 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
CLCN1P35523 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 AC020763.4-201ENST00000623414 4170 ntBASIC22.04■■□□□ 1.12
CLCN1P35523 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CLCN1P35523 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.04■■□□□ 1.12
CLCN1P35523 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.04■■□□□ 1.12
CLCN1P35523 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.04■■□□□ 1.12
CLCN1P35523 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.04■■□□□ 1.12
CLCN1P35523 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CLCN1P35523 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.04■■□□□ 1.12
CLCN1P35523 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN1P35523 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCN1P35523 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CLCN1P35523 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN1P35523 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN1P35523 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN1P35523 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.03■■□□□ 1.12
CLCN1P35523 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN1P35523 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CLCN1P35523 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN1P35523 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 AC011270.2-201ENST00000624293 2550 ntBASIC22.02■■□□□ 1.12
CLCN1P35523 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 AC116050.2-201ENST00000612102 1779 ntBASIC22.02■■□□□ 1.12
CLCN1P35523 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.02■■□□□ 1.12
CLCN1P35523 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CLCN1P35523 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.02■■□□□ 1.12
CLCN1P35523 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.02■■□□□ 1.12
CLCN1P35523 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.02■■□□□ 1.12
CLCN1P35523 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 MYCNOS-205ENST00000641950 531 ntBASIC22.02■■□□□ 1.12
CLCN1P35523 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CLCN1P35523 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN1P35523 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CLCN1P35523 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
CLCN1P35523 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLCN1P35523 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLCN1P35523 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.02■■□□□ 1.11
CLCN1P35523 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLCN1P35523 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CLCN1P35523 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.01■■□□□ 1.11
CLCN1P35523 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.01■■□□□ 1.11
CLCN1P35523 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CLCN1P35523 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLCN1P35523 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.01■■□□□ 1.11
CLCN1P35523 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CLCN1P35523 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.01■■□□□ 1.11
CLCN1P35523 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.01■■□□□ 1.11
CLCN1P35523 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.01■■□□□ 1.11
CLCN1P35523 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN1P35523 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN1P35523 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms