Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARSP26640 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.06■□□□□ 0.64
VARSP26640 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.06■□□□□ 0.64
VARSP26640 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VARSP26640 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VARSP26640 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VARSP26640 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VARSP26640 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.05■□□□□ 0.64
VARSP26640 AC008550.1-201ENST00000511500 884 ntBASIC19.05■□□□□ 0.64
VARSP26640 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.05■□□□□ 0.64
VARSP26640 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.05■□□□□ 0.64
VARSP26640 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.05■□□□□ 0.64
VARSP26640 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
VARSP26640 AC093484.2-201ENST00000580996 2166 ntBASIC19.05■□□□□ 0.64
VARSP26640 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARSP26640 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARSP26640 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.04■□□□□ 0.64
VARSP26640 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.04■□□□□ 0.64
VARSP26640 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARSP26640 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.04■□□□□ 0.64
VARSP26640 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.04■□□□□ 0.64
VARSP26640 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VARSP26640 AC073648.6-201ENST00000641589 218 ntBASIC19.04■□□□□ 0.64
VARSP26640 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARSP26640 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARSP26640 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARSP26640 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 AC005082.1-201ENST00000413042 2259 ntBASIC19.03■□□□□ 0.64
VARSP26640 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.03■□□□□ 0.64
VARSP26640 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VARSP26640 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 AC116351.2-201ENST00000606540 1585 ntBASIC19.03■□□□□ 0.64
VARSP26640 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 AC004408.2-201ENST00000623613 2777 ntBASIC19.03■□□□□ 0.64
VARSP26640 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.03■□□□□ 0.64
VARSP26640 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.03■□□□□ 0.64
VARSP26640 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.03■□□□□ 0.64
VARSP26640 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.03■□□□□ 0.64
VARSP26640 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.03■□□□□ 0.64
VARSP26640 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.03■□□□□ 0.64
VARSP26640 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VARSP26640 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.02■□□□□ 0.64
VARSP26640 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.64
VARSP26640 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VARSP26640 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VARSP26640 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VARSP26640 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.02■□□□□ 0.64
VARSP26640 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.02■□□□□ 0.64
VARSP26640 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms