Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MMP8P22894 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP8P22894 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP8P22894 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP8P22894 AC018445.3-201ENST00000624177 1945 ntBASIC20.45■□□□□ 0.86
MMP8P22894 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP8P22894 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP8P22894 TEX21P-204ENST00000641479 1693 ntBASIC20.45■□□□□ 0.86
MMP8P22894 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 BX323043.1-201ENST00000641006 1765 ntBASIC20.44■□□□□ 0.86
MMP8P22894 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP8P22894 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.44■□□□□ 0.86
MMP8P22894 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 KRASP1-201ENST00000407852 552 ntBASIC20.44■□□□□ 0.86
MMP8P22894 AC239809.2-201ENST00000415381 517 ntBASIC20.44■□□□□ 0.86
MMP8P22894 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP8P22894 AC128676.1-201ENST00000454392 318 ntBASIC20.44■□□□□ 0.86
MMP8P22894 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 AC133681.1-201ENST00000465482 601 ntBASIC20.44■□□□□ 0.86
MMP8P22894 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
MMP8P22894 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP8P22894 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP8P22894 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MMP8P22894 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
MMP8P22894 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.43■□□□□ 0.86
MMP8P22894 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 AC141586.3-201ENST00000562166 1838 ntBASIC20.43■□□□□ 0.86
MMP8P22894 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.43■□□□□ 0.86
MMP8P22894 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP8P22894 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP8P22894 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
MMP8P22894 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.42■□□□□ 0.86
MMP8P22894 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.42■□□□□ 0.86
MMP8P22894 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP8P22894 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP8P22894 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MMP8P22894 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.41■□□□□ 0.86
MMP8P22894 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms