Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PDE6GP18545 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
PDE6GP18545 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
PDE6GP18545 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6GP18545 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6GP18545 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6GP18545 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
PDE6GP18545 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6GP18545 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6GP18545 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6GP18545 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.02□□□□□ -0.48
PDE6GP18545 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6GP18545 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC12.02□□□□□ -0.49
PDE6GP18545 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6GP18545 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PDE6GP18545 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6GP18545 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 AL161938.1-201ENST00000569833 2180 ntBASIC12.02□□□□□ -0.49
PDE6GP18545 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PDE6GP18545 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6GP18545 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.02□□□□□ -0.49
PDE6GP18545 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6GP18545 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 AP001271.2-201ENST00000624018 1556 ntBASIC12.01□□□□□ -0.49
PDE6GP18545 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6GP18545 AC141586.5-201ENST00000624546 2050 ntBASIC12.01□□□□□ -0.49
PDE6GP18545 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.01□□□□□ -0.49
PDE6GP18545 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
PDE6GP18545 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PDE6GP18545 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6GP18545 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6GP18545 TK2-216ENST00000564917 1156 ntTSL 3 BASIC12.01□□□□□ -0.49
PDE6GP18545 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PDE6GP18545 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 KRT8P36-201ENST00000489121 1440 ntBASIC12.01□□□□□ -0.49
PDE6GP18545 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6GP18545 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6GP18545 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.01□□□□□ -0.49
PDE6GP18545 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12□□□□□ -0.49
PDE6GP18545 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
PDE6GP18545 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12□□□□□ -0.49
PDE6GP18545 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12□□□□□ -0.49
PDE6GP18545 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
PDE6GP18545 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PDE6GP18545 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12□□□□□ -0.49
PDE6GP18545 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
PDE6GP18545 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC12□□□□□ -0.49
PDE6GP18545 MTDHP2-201ENST00000601468 714 ntBASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms