Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 AC068880.1-201ENST00000507289 2297 ntBASIC16.34■□□□□ 0.21
CD74P04233 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CD74P04233 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD74P04233 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD74P04233 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CD74P04233 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD74P04233 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD74P04233 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD74P04233 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 ZNF815P-204ENST00000434898 1737 ntBASIC16.33■□□□□ 0.2
CD74P04233 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.33■□□□□ 0.2
CD74P04233 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.33■□□□□ 0.2
CD74P04233 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CD74P04233 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.33■□□□□ 0.2
CD74P04233 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD74P04233 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD74P04233 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.32■□□□□ 0.2
CD74P04233 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CD74P04233 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD74P04233 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.32■□□□□ 0.2
CD74P04233 AC100791.3-201ENST00000617619 330 ntBASIC16.32■□□□□ 0.2
CD74P04233 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 AC004854.2-201ENST00000608450 1441 ntBASIC16.31■□□□□ 0.2
CD74P04233 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.31■□□□□ 0.2
CD74P04233 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CD74P04233 AC023632.3-201ENST00000521633 145 ntBASIC16.31■□□□□ 0.2
CD74P04233 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.31■□□□□ 0.2
CD74P04233 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.31■□□□□ 0.2
CD74P04233 MFSD11-216ENST00000590393 1141 ntBASIC16.31■□□□□ 0.2
CD74P04233 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 AC110285.6-201ENST00000617652 491 ntBASIC16.31■□□□□ 0.2
CD74P04233 AC105020.6-201ENST00000621523 1217 ntBASIC16.31■□□□□ 0.2
CD74P04233 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD74P04233 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
CD74P04233 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.31■□□□□ 0.2
CD74P04233 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD74P04233 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.31■□□□□ 0.2
CD74P04233 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.31■□□□□ 0.2
CD74P04233 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD74P04233 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 MCRIP2P1-201ENST00000394346 511 ntBASIC16.3■□□□□ 0.2
CD74P04233 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms