Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DHFRP00374 AC009237.3-201ENST00000393279 1427 ntBASIC16.79■□□□□ 0.28
DHFRP00374 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.79■□□□□ 0.28
DHFRP00374 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
DHFRP00374 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
DHFRP00374 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.79■□□□□ 0.28
DHFRP00374 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.79■□□□□ 0.28
DHFRP00374 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.79■□□□□ 0.28
DHFRP00374 SMUG1P1-201ENST00000590640 811 ntBASIC16.79■□□□□ 0.28
DHFRP00374 AC105233.4-201ENST00000642045 216 ntBASIC16.79■□□□□ 0.28
DHFRP00374 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DHFRP00374 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DHFRP00374 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
DHFRP00374 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DHFRP00374 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.79■□□□□ 0.28
DHFRP00374 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.79■□□□□ 0.28
DHFRP00374 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
DHFRP00374 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 AC006333.2-201ENST00000607957 2099 ntBASIC16.78■□□□□ 0.28
DHFRP00374 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 MIR939-201ENST00000401314 82 ntBASIC16.78■□□□□ 0.28
DHFRP00374 AF213884.3-201ENST00000563833 479 ntBASIC16.78■□□□□ 0.28
DHFRP00374 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.78■□□□□ 0.28
DHFRP00374 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 MKRN4P-201ENST00000444706 1521 ntBASIC16.78■□□□□ 0.28
DHFRP00374 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
DHFRP00374 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
DHFRP00374 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DHFRP00374 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.77■□□□□ 0.28
DHFRP00374 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
DHFRP00374 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.77■□□□□ 0.28
DHFRP00374 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.77■□□□□ 0.28
DHFRP00374 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
DHFRP00374 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DHFRP00374 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.77■□□□□ 0.27
DHFRP00374 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.77■□□□□ 0.27
DHFRP00374 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
DHFRP00374 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
DHFRP00374 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
DHFRP00374 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.77■□□□□ 0.27
DHFRP00374 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
DHFRP00374 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
DHFRP00374 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DHFRP00374 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
DHFRP00374 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.77■□□□□ 0.27
DHFRP00374 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.76■□□□□ 0.27
DHFRP00374 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
DHFRP00374 AC142381.2-201ENST00000566120 298 ntBASIC16.76■□□□□ 0.27
DHFRP00374 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 PRORSD1P-202ENST00000563365 2154 ntBASIC16.76■□□□□ 0.27
DHFRP00374 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DHFRP00374 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms