Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A2O94788 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A2O94788 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALDH1A2O94788 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.18■□□□□ 0.82
ALDH1A2O94788 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ALDH1A2O94788 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 TMPOP1-202ENST00000424642 1267 ntBASIC20.17■□□□□ 0.82
ALDH1A2O94788 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.17■□□□□ 0.82
ALDH1A2O94788 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALDH1A2O94788 PTBP1P-201ENST00000554374 1601 ntBASIC20.16■□□□□ 0.82
ALDH1A2O94788 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A2O94788 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.16■□□□□ 0.82
ALDH1A2O94788 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 UNC93B2-201ENST00000285383 730 ntBASIC20.16■□□□□ 0.82
ALDH1A2O94788 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A2O94788 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A2O94788 AC116562.4-201ENST00000641316 2276 ntBASIC20.16■□□□□ 0.82
ALDH1A2O94788 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALDH1A2O94788 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
ALDH1A2O94788 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 NUDT16P1-203ENST00000513809 620 ntBASIC20.15■□□□□ 0.82
ALDH1A2O94788 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ALDH1A2O94788 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALDH1A2O94788 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALDH1A2O94788 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ALDH1A2O94788 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 TREX1-205ENST00000625293 1783 ntBASIC20.14■□□□□ 0.81
ALDH1A2O94788 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ALDH1A2O94788 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ALDH1A2O94788 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A2O94788 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.13■□□□□ 0.81
ALDH1A2O94788 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
ALDH1A2O94788 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
ALDH1A2O94788 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
ALDH1A2O94788 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A2O94788 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A2O94788 AIRN-201ENST00000601203 4374 ntBASIC20.13■□□□□ 0.81
ALDH1A2O94788 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A2O94788 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALDH1A2O94788 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms