Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF9O60383 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF9O60383 AP000523.1-201ENST00000398242 1049 ntBASIC18.96■□□□□ 0.63
GDF9O60383 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.96■□□□□ 0.63
GDF9O60383 EMBP1-201ENST00000458200 901 ntBASIC18.96■□□□□ 0.63
GDF9O60383 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.96■□□□□ 0.63
GDF9O60383 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.96■□□□□ 0.63
GDF9O60383 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.96■□□□□ 0.63
GDF9O60383 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GDF9O60383 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
GDF9O60383 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF9O60383 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF9O60383 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.96■□□□□ 0.63
GDF9O60383 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF9O60383 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
GDF9O60383 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GDF9O60383 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
GDF9O60383 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.95■□□□□ 0.62
GDF9O60383 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.95■□□□□ 0.62
GDF9O60383 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GDF9O60383 AL031008.1-201ENST00000619963 541 ntBASIC18.95■□□□□ 0.62
GDF9O60383 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.95■□□□□ 0.62
GDF9O60383 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.95■□□□□ 0.62
GDF9O60383 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.95■□□□□ 0.62
GDF9O60383 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF9O60383 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.94■□□□□ 0.62
GDF9O60383 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.94■□□□□ 0.62
GDF9O60383 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.94■□□□□ 0.62
GDF9O60383 AL645929.1-201ENST00000420084 975 ntBASIC18.94■□□□□ 0.62
GDF9O60383 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.94■□□□□ 0.62
GDF9O60383 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 MIR3180-1-201ENST00000580374 94 ntBASIC18.94■□□□□ 0.62
GDF9O60383 MIR3180-3-201ENST00000584616 94 ntBASIC18.94■□□□□ 0.62
GDF9O60383 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.94■□□□□ 0.62
GDF9O60383 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.94■□□□□ 0.62
GDF9O60383 IFNL4P1-201ENST00000607083 540 ntBASIC18.94■□□□□ 0.62
GDF9O60383 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GDF9O60383 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GDF9O60383 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.93■□□□□ 0.62
GDF9O60383 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF9O60383 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
GDF9O60383 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
GDF9O60383 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GDF9O60383 TSSC2-201ENST00000450217 709 ntBASIC18.93■□□□□ 0.62
GDF9O60383 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GDF9O60383 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF9O60383 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF9O60383 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GDF9O60383 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF9O60383 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
GDF9O60383 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GDF9O60383 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GDF9O60383 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GDF9O60383 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.92■□□□□ 0.62
GDF9O60383 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.92■□□□□ 0.62
GDF9O60383 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.92■□□□□ 0.62
GDF9O60383 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.92■□□□□ 0.62
GDF9O60383 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GDF9O60383 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GDF9O60383 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF9O60383 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.92■□□□□ 0.62
GDF9O60383 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms