Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
XRCC2O43543 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.87■□□□□ 0.29
XRCC2O43543 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC2O43543 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
XRCC2O43543 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC2O43543 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.87■□□□□ 0.29
XRCC2O43543 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.87■□□□□ 0.29
XRCC2O43543 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC2O43543 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC2O43543 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
XRCC2O43543 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC2O43543 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
XRCC2O43543 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 POM121L13P-201ENST00000422362 380 ntBASIC16.86■□□□□ 0.29
XRCC2O43543 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.86■□□□□ 0.29
XRCC2O43543 PRKY-204ENST00000533551 1019 ntBASIC16.86■□□□□ 0.29
XRCC2O43543 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
XRCC2O43543 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 Z82202.1-201ENST00000623446 1880 ntBASIC16.86■□□□□ 0.29
XRCC2O43543 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.86■□□□□ 0.29
XRCC2O43543 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
XRCC2O43543 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.86■□□□□ 0.29
XRCC2O43543 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
XRCC2O43543 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC2O43543 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.85■□□□□ 0.29
XRCC2O43543 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
XRCC2O43543 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.85■□□□□ 0.29
XRCC2O43543 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 KRT8P8-201ENST00000434750 1448 ntBASIC16.85■□□□□ 0.29
XRCC2O43543 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
XRCC2O43543 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC2O43543 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC2O43543 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
XRCC2O43543 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms