Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TLR4O00206 AC004951.3-201ENST00000418645 1148 ntBASIC19.26■□□□□ 0.67
TLR4O00206 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.26■□□□□ 0.67
TLR4O00206 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 DUX4L26-201ENST00000489078 1255 ntBASIC19.26■□□□□ 0.67
TLR4O00206 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TLR4O00206 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.26■□□□□ 0.67
TLR4O00206 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TLR4O00206 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.26■□□□□ 0.67
TLR4O00206 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.25■□□□□ 0.67
TLR4O00206 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.25■□□□□ 0.67
TLR4O00206 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TLR4O00206 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TLR4O00206 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.25■□□□□ 0.67
TLR4O00206 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TLR4O00206 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TLR4O00206 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TLR4O00206 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TLR4O00206 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TLR4O00206 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TLR4O00206 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TLR4O00206 AC008040.2-201ENST00000461049 708 ntBASIC19.24■□□□□ 0.67
TLR4O00206 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TLR4O00206 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TLR4O00206 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.24■□□□□ 0.67
TLR4O00206 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TLR4O00206 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
TLR4O00206 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TLR4O00206 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TLR4O00206 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TLR4O00206 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TLR4O00206 BX119927.1-201ENST00000636596 1552 ntBASIC19.23■□□□□ 0.67
TLR4O00206 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.23■□□□□ 0.67
TLR4O00206 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.23■□□□□ 0.67
TLR4O00206 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.23■□□□□ 0.67
TLR4O00206 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.23■□□□□ 0.67
TLR4O00206 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.23■□□□□ 0.67
TLR4O00206 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TLR4O00206 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TLR4O00206 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TLR4O00206 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TLR4O00206 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TLR4O00206 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.22■□□□□ 0.67
TLR4O00206 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TLR4O00206 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms