Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMX2-CTNND1H3BSU7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 NIFKP9-201ENST00000419265 221 ntBASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 REXO1L10P-201ENST00000615707 1290 ntBASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 KRT16P1-201ENST00000399124 1418 ntBASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMX2-CTNND1H3BSU7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC116562.4-201ENST00000641316 2276 ntBASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AL590326.2-201ENST00000625139 305 ntBASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC004408.2-201ENST00000623613 2777 ntBASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMX2-CTNND1H3BSU7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC116562.2-201ENST00000507042 360 ntBASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 CR392000.1-201ENST00000624770 1228 ntBASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMX2-CTNND1H3BSU7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TMX2-CTNND1H3BSU7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMX2-CTNND1H3BSU7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMX2-CTNND1H3BSU7 KRT18P22-201ENST00000402024 1347 ntBASIC19.03■□□□□ 0.64
TMX2-CTNND1H3BSU7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms