Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.68■■□□□ 1.22
TMEM88BA6NKF7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 AL353801.3-201ENST00000609898 542 ntBASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 KRT8P41-201ENST00000533985 1514 ntBASIC22.67■■□□□ 1.22
TMEM88BA6NKF7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 TSPY22P-201ENST00000427496 604 ntBASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 TOB2P1-201ENST00000469761 992 ntBASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM88BA6NKF7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 AL121603.2-201ENST00000557373 2117 ntBASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 ECEL1P1-201ENST00000373592 1742 ntBASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.65■■□□□ 1.22
TMEM88BA6NKF7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM88BA6NKF7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 MIR4674-201ENST00000582457 87 ntBASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 AC064862.7-201ENST00000604520 867 ntBASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 AC005229.4-201ENST00000610085 2198 ntBASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM88BA6NKF7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AC022898.2-201ENST00000616822 1312 ntBASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 DPP3P2-201ENST00000416030 1696 ntBASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 SLC25A1P1-201ENST00000528351 927 ntBASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 AP001005.1-201ENST00000571755 1248 ntBASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms