Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 KRT8P17-201ENST00000453110 1448 ntBASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 AL512353.2-201ENST00000448759 1962 ntBASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 BX842568.3-201ENST00000418104 571 ntBASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 MIR3621-201ENST00000580529 85 ntBASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV12-1A0A0B4J245 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 HTR7P1-202ENST00000624664 4411 ntBASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV12-1A0A0B4J245 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV12-1A0A0B4J245 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms