Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AP000238.1-201ENST00000608759 426 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AL080312.2-201ENST00000613001 630 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AC137590.2-201ENST00000619709 240 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AP001264.1-201ENST00000620602 703 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AC090617.10-201ENST00000624308 134 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 AC138393.1-206ENST00000540997 1886 ntBASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RSPO4Q2I0M5 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 OR52B3P-201ENST00000314715 928 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RNA5SP477-201ENST00000362639 119 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RNU6-451P-201ENST00000362921 107 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RN7SKP292-201ENST00000365522 317 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RNA5SP88-201ENST00000365560 109 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 Y_RNA.387-201ENST00000383918 102 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 SNORA51.12-201ENST00000384448 134 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 OR2AT2P-201ENST00000413438 905 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AL929472.1-201ENST00000417484 429 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RPL5P6-201ENST00000425640 886 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 MTCO3P46-201ENST00000425787 232 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AL356583.2-201ENST00000426536 280 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 FCF1P1-201ENST00000432690 571 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RABEPKP1-201ENST00000440529 1026 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RPS24P13-201ENST00000442520 397 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 YWHAEP1-201ENST00000453697 763 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC073594.1-201ENST00000462065 364 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC083806.1-201ENST00000468934 316 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RN7SL799P-201ENST00000475891 298 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 ACTG1P13-201ENST00000486987 1043 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RPL35P6-201ENST00000490024 372 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RN7SL187P-201ENST00000495587 303 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RNA5SP362-201ENST00000516048 118 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC109635.6-201ENST00000525487 1113 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC036111.2-201ENST00000533247 901 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 DPPA3P3-201ENST00000603842 430 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 SUMO2P14-201ENST00000604488 293 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 U1.41-201ENST00000617626 165 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC018445.2-201ENST00000622987 260 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC139792.3-201ENST00000623525 224 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 RLIMP2-201ENST00000427891 1563 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 UGT2B25P-201ENST00000511504 1586 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AC079777.1-201ENST00000623836 1953 ntBASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RSPO4Q2I0M5 AL023806.3-201ENST00000638502 2704 ntBASIC6.41□□□□□ -1.38
RSPO4Q2I0M5 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RSPO4Q2I0M5 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.41□□□□□ -1.38
RSPO4Q2I0M5 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms