RNA–Protein interactions for RNA: ENST00000525187.5

GRIA4-206, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-206ENST00000525187 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
GRIA4-206ENST00000525187 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
GRIA4-206ENST00000525187 MYT1Q01538 1121 aa14.14□□□□□ -0.15
GRIA4-206ENST00000525187 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
GRIA4-206ENST00000525187 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
GRIA4-206ENST00000525187 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
GRIA4-206ENST00000525187 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
GRIA4-206ENST00000525187 ERICH6Q7L0X2 663 aa13.17□□□□□ -0.3
GRIA4-206ENST00000525187 APLP2Q06481 763 aa13.16□□□□□ -0.3
GRIA4-206ENST00000525187 AEBP2Q6ZN18 517 aaPredicted RBP12.9□□□□□ -0.34
GRIA4-206ENST00000525187 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
GRIA4-206ENST00000525187 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
GRIA4-206ENST00000525187 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
GRIA4-206ENST00000525187 DCAF1Q9Y4B6 1507 aa12.75□□□□□ -0.37
GRIA4-206ENST00000525187 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
GRIA4-206ENST00000525187 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
GRIA4-206ENST00000525187 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
GRIA4-206ENST00000525187 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
GRIA4-206ENST00000525187 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
GRIA4-206ENST00000525187 HRCP23327 699 aa12.37□□□□□ -0.43
GRIA4-206ENST00000525187 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
GRIA4-206ENST00000525187 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
GRIA4-206ENST00000525187 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
GRIA4-206ENST00000525187 NACADO15069 1562 aa12.16□□□□□ -0.46
GRIA4-206ENST00000525187 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
GRIA4-206ENST00000525187 ABCC9O60706 1549 aa12.15□□□□□ -0.46
GRIA4-206ENST00000525187 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
GRIA4-206ENST00000525187 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
GRIA4-206ENST00000525187 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
GRIA4-206ENST00000525187 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.49
GRIA4-206ENST00000525187 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
GRIA4-206ENST00000525187 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
GRIA4-206ENST00000525187 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
GRIA4-206ENST00000525187 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
GRIA4-206ENST00000525187 UBE2Q2Q8WVN8 375 aa11.9□□□□□ -0.5
GRIA4-206ENST00000525187 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
GRIA4-206ENST00000525187 ARXQ96QS3 562 aa11.86□□□□□ -0.51
GRIA4-206ENST00000525187 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
GRIA4-206ENST00000525187 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
GRIA4-206ENST00000525187 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
GRIA4-206ENST00000525187 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
GRIA4-206ENST00000525187 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
GRIA4-206ENST00000525187 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
GRIA4-206ENST00000525187 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
GRIA4-206ENST00000525187 MROH2BQ7Z745 1585 aa11.68□□□□□ -0.54
GRIA4-206ENST00000525187 CECR2Q9BXF3 1484 aa11.65□□□□□ -0.55
GRIA4-206ENST00000525187 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
GRIA4-206ENST00000525187 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
GRIA4-206ENST00000525187 WIZO95785 1651 aa11.58□□□□□ -0.55
GRIA4-206ENST00000525187 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
GRIA4-206ENST00000525187 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
GRIA4-206ENST00000525187 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
GRIA4-206ENST00000525187 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
GRIA4-206ENST00000525187 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
GRIA4-206ENST00000525187 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
GRIA4-206ENST00000525187 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
GRIA4-206ENST00000525187 PEG3Q9GZU2 1588 aa11.55□□□□□ -0.56
GRIA4-206ENST00000525187 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
GRIA4-206ENST00000525187 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.56
GRIA4-206ENST00000525187 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
GRIA4-206ENST00000525187 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
GRIA4-206ENST00000525187 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
GRIA4-206ENST00000525187 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
GRIA4-206ENST00000525187 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.58
GRIA4-206ENST00000525187 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
GRIA4-206ENST00000525187 EEA1Q15075 1411 aa11.44□□□□□ -0.58
GRIA4-206ENST00000525187 NEFLP07196 543 aa11.44□□□□□ -0.58
GRIA4-206ENST00000525187 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
GRIA4-206ENST00000525187 CCER1Q8TC90 406 aaPredicted RBP11.41□□□□□ -0.58
GRIA4-206ENST00000525187 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
GRIA4-206ENST00000525187 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
GRIA4-206ENST00000525187 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
GRIA4-206ENST00000525187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
GRIA4-206ENST00000525187 PDE4CQ08493 712 aa11.35□□□□□ -0.59
GRIA4-206ENST00000525187 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
GRIA4-206ENST00000525187 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
GRIA4-206ENST00000525187 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
GRIA4-206ENST00000525187 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
GRIA4-206ENST00000525187 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
GRIA4-206ENST00000525187 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
GRIA4-206ENST00000525187 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
GRIA4-206ENST00000525187 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
GRIA4-206ENST00000525187 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
GRIA4-206ENST00000525187 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
GRIA4-206ENST00000525187 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
GRIA4-206ENST00000525187 ABCC8Q09428 1581 aa11.21□□□□□ -0.61
GRIA4-206ENST00000525187 FGD1P98174 961 aa11.21□□□□□ -0.62
GRIA4-206ENST00000525187 KIF21BO75037 1637 aa11.2□□□□□ -0.62
GRIA4-206ENST00000525187 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
GRIA4-206ENST00000525187 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
GRIA4-206ENST00000525187 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
GRIA4-206ENST00000525187 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
GRIA4-206ENST00000525187 SOGA1O94964 1423 aa11.17□□□□□ -0.62
GRIA4-206ENST00000525187 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
GRIA4-206ENST00000525187 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
GRIA4-206ENST00000525187 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
GRIA4-206ENST00000525187 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
GRIA4-206ENST00000525187 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
GRIA4-206ENST00000525187 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
GRIA4-206ENST00000525187 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms