RNA–Protein interactions for RNA: ENST00000518090.1

AP003469.3-201, humanhuman

TSL 3 BASIC

Gene AP003469.3, Length 473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003469.3-201ENST00000518090 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
AP003469.3-201ENST00000518090 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
AP003469.3-201ENST00000518090 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
AP003469.3-201ENST00000518090 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
AP003469.3-201ENST00000518090 FOXD1Q16676 465 aa16.28■□□□□ 0.2
AP003469.3-201ENST00000518090 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
AP003469.3-201ENST00000518090 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
AP003469.3-201ENST00000518090 ADRA2BP18089 450 aa15.5■□□□□ 0.07
AP003469.3-201ENST00000518090 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
AP003469.3-201ENST00000518090 MSH5O43196 834 aa15.06■□□□□ 0
AP003469.3-201ENST00000518090 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
AP003469.3-201ENST00000518090 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
AP003469.3-201ENST00000518090 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
AP003469.3-201ENST00000518090 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
AP003469.3-201ENST00000518090 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
AP003469.3-201ENST00000518090 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
AP003469.3-201ENST00000518090 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
AP003469.3-201ENST00000518090 KCNA4P22459 653 aa13.68□□□□□ -0.22
AP003469.3-201ENST00000518090 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
AP003469.3-201ENST00000518090 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
AP003469.3-201ENST00000518090 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
AP003469.3-201ENST00000518090 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
AP003469.3-201ENST00000518090 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
AP003469.3-201ENST00000518090 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
AP003469.3-201ENST00000518090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
AP003469.3-201ENST00000518090 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
AP003469.3-201ENST00000518090 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
AP003469.3-201ENST00000518090 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
AP003469.3-201ENST00000518090 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
AP003469.3-201ENST00000518090 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
AP003469.3-201ENST00000518090 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
AP003469.3-201ENST00000518090 ZBTB22O15209 634 aa12.61□□□□□ -0.39
AP003469.3-201ENST00000518090 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
AP003469.3-201ENST00000518090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
AP003469.3-201ENST00000518090 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
AP003469.3-201ENST00000518090 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
AP003469.3-201ENST00000518090 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
AP003469.3-201ENST00000518090 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
AP003469.3-201ENST00000518090 APLP2Q06481 763 aa12.39□□□□□ -0.43
AP003469.3-201ENST00000518090 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
AP003469.3-201ENST00000518090 CAPN15O75808 1086 aa12.36□□□□□ -0.43
AP003469.3-201ENST00000518090 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
AP003469.3-201ENST00000518090 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
AP003469.3-201ENST00000518090 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
AP003469.3-201ENST00000518090 DSG3P32926 999 aa12.22□□□□□ -0.45
AP003469.3-201ENST00000518090 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
AP003469.3-201ENST00000518090 ABCB7O75027 752 aa12.13□□□□□ -0.47
AP003469.3-201ENST00000518090 POLA2Q14181 598 aa12.02□□□□□ -0.49
AP003469.3-201ENST00000518090 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
AP003469.3-201ENST00000518090 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
AP003469.3-201ENST00000518090 FBLN2P98095 1184 aa11.7□□□□□ -0.54
AP003469.3-201ENST00000518090 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
AP003469.3-201ENST00000518090 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
AP003469.3-201ENST00000518090 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
AP003469.3-201ENST00000518090 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
AP003469.3-201ENST00000518090 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
AP003469.3-201ENST00000518090 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
AP003469.3-201ENST00000518090 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
AP003469.3-201ENST00000518090 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
AP003469.3-201ENST00000518090 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
AP003469.3-201ENST00000518090 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
AP003469.3-201ENST00000518090 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
AP003469.3-201ENST00000518090 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
AP003469.3-201ENST00000518090 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
AP003469.3-201ENST00000518090 FKBP8Q14318 412 aa11.19□□□□□ -0.62
AP003469.3-201ENST00000518090 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
AP003469.3-201ENST00000518090 PROM2Q8N271 834 aa11.16□□□□□ -0.62
AP003469.3-201ENST00000518090 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
AP003469.3-201ENST00000518090 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
AP003469.3-201ENST00000518090 POTEHQ6S545 545 aa11.06□□□□□ -0.64
AP003469.3-201ENST00000518090 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
AP003469.3-201ENST00000518090 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
AP003469.3-201ENST00000518090 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
AP003469.3-201ENST00000518090 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
AP003469.3-201ENST00000518090 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
AP003469.3-201ENST00000518090 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
AP003469.3-201ENST00000518090 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
AP003469.3-201ENST00000518090 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
AP003469.3-201ENST00000518090 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
AP003469.3-201ENST00000518090 MIER1Q8N108 512 aa10.74□□□□□ -0.69
AP003469.3-201ENST00000518090 HAX1O00165 279 aa10.71□□□□□ -0.69
AP003469.3-201ENST00000518090 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
AP003469.3-201ENST00000518090 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
AP003469.3-201ENST00000518090 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
AP003469.3-201ENST00000518090 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
AP003469.3-201ENST00000518090 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
AP003469.3-201ENST00000518090 EVX2Q03828 476 aa10.64□□□□□ -0.71
AP003469.3-201ENST00000518090 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
AP003469.3-201ENST00000518090 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
AP003469.3-201ENST00000518090 SP7Q8TDD2 431 aaPredicted RBP10.56□□□□□ -0.72
AP003469.3-201ENST00000518090 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
AP003469.3-201ENST00000518090 NUBP1P53384 320 aa10.52□□□□□ -0.73
AP003469.3-201ENST00000518090 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
AP003469.3-201ENST00000518090 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
AP003469.3-201ENST00000518090 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
AP003469.3-201ENST00000518090 PAK3O75914 559 aaPredicted RBP10.51□□□□□ -0.73
AP003469.3-201ENST00000518090 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
AP003469.3-201ENST00000518090 TSPYL2Q9H2G4 693 aaPredicted RBP10.48□□□□□ -0.73
AP003469.3-201ENST00000518090 CCDC61Q9Y6R9 512 aa10.44□□□□□ -0.74
AP003469.3-201ENST00000518090 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms