RNA–Protein interactions for RNA: ENST00000427891.2

RLIMP2-201, Transcript of ring finger protein, LIM domain interacting pseudogene 2, humanhuman

BASIC

Gene RLIMP2, Length 1,563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMP2-201ENST00000427891 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
RLIMP2-201ENST00000427891 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
RLIMP2-201ENST00000427891 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
RLIMP2-201ENST00000427891 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
RLIMP2-201ENST00000427891 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
RLIMP2-201ENST00000427891 FOXD1Q16676 465 aa16.81■□□□□ 0.28
RLIMP2-201ENST00000427891 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
RLIMP2-201ENST00000427891 MSH5O43196 834 aa16.02■□□□□ 0.16
RLIMP2-201ENST00000427891 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
RLIMP2-201ENST00000427891 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
RLIMP2-201ENST00000427891 ADRA2BP18089 450 aa15.57■□□□□ 0.08
RLIMP2-201ENST00000427891 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
RLIMP2-201ENST00000427891 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
RLIMP2-201ENST00000427891 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
RLIMP2-201ENST00000427891 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
RLIMP2-201ENST00000427891 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
RLIMP2-201ENST00000427891 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
RLIMP2-201ENST00000427891 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.22
RLIMP2-201ENST00000427891 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
RLIMP2-201ENST00000427891 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
RLIMP2-201ENST00000427891 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.23
RLIMP2-201ENST00000427891 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
RLIMP2-201ENST00000427891 POTEHQ6S545 545 aa13.54□□□□□ -0.24
RLIMP2-201ENST00000427891 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
RLIMP2-201ENST00000427891 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
RLIMP2-201ENST00000427891 KCNA4P22459 653 aa13.34□□□□□ -0.27
RLIMP2-201ENST00000427891 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
RLIMP2-201ENST00000427891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
RLIMP2-201ENST00000427891 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
RLIMP2-201ENST00000427891 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
RLIMP2-201ENST00000427891 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
RLIMP2-201ENST00000427891 CAPN15O75808 1086 aa12.56□□□□□ -0.4
RLIMP2-201ENST00000427891 DSG3P32926 999 aa12.54□□□□□ -0.4
RLIMP2-201ENST00000427891 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
RLIMP2-201ENST00000427891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
RLIMP2-201ENST00000427891 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
RLIMP2-201ENST00000427891 APLP2Q06481 763 aa12.41□□□□□ -0.42
RLIMP2-201ENST00000427891 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
RLIMP2-201ENST00000427891 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
RLIMP2-201ENST00000427891 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
RLIMP2-201ENST00000427891 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
RLIMP2-201ENST00000427891 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
RLIMP2-201ENST00000427891 ZBTB22O15209 634 aa12.25□□□□□ -0.45
RLIMP2-201ENST00000427891 ABCB7O75027 752 aa12.24□□□□□ -0.45
RLIMP2-201ENST00000427891 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
RLIMP2-201ENST00000427891 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
RLIMP2-201ENST00000427891 POLA2Q14181 598 aa12.07□□□□□ -0.48
RLIMP2-201ENST00000427891 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
RLIMP2-201ENST00000427891 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
RLIMP2-201ENST00000427891 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.5
RLIMP2-201ENST00000427891 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
RLIMP2-201ENST00000427891 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
RLIMP2-201ENST00000427891 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
RLIMP2-201ENST00000427891 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
RLIMP2-201ENST00000427891 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
RLIMP2-201ENST00000427891 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
RLIMP2-201ENST00000427891 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
RLIMP2-201ENST00000427891 FBLN2P98095 1184 aa11.62□□□□□ -0.55
RLIMP2-201ENST00000427891 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
RLIMP2-201ENST00000427891 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
RLIMP2-201ENST00000427891 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
RLIMP2-201ENST00000427891 HAX1O00165 279 aa11.49□□□□□ -0.57
RLIMP2-201ENST00000427891 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
RLIMP2-201ENST00000427891 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
RLIMP2-201ENST00000427891 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
RLIMP2-201ENST00000427891 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
RLIMP2-201ENST00000427891 ZNF692Q9BU19 519 aaPredicted RBP11.39□□□□□ -0.59
RLIMP2-201ENST00000427891 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
RLIMP2-201ENST00000427891 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
RLIMP2-201ENST00000427891 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
RLIMP2-201ENST00000427891 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
RLIMP2-201ENST00000427891 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
RLIMP2-201ENST00000427891 LHX8Q68G74 356 aa11.19□□□□□ -0.62
RLIMP2-201ENST00000427891 EVX2Q03828 476 aa11.18□□□□□ -0.62
RLIMP2-201ENST00000427891 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
RLIMP2-201ENST00000427891 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
RLIMP2-201ENST00000427891 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
RLIMP2-201ENST00000427891 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
RLIMP2-201ENST00000427891 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
RLIMP2-201ENST00000427891 GABBR2O75899 941 aa10.99□□□□□ -0.65
RLIMP2-201ENST00000427891 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
RLIMP2-201ENST00000427891 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
RLIMP2-201ENST00000427891 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
RLIMP2-201ENST00000427891 PROM2Q8N271 834 aa10.83□□□□□ -0.68
RLIMP2-201ENST00000427891 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
RLIMP2-201ENST00000427891 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
RLIMP2-201ENST00000427891 CLCN6P51797 869 aa10.81□□□□□ -0.68
RLIMP2-201ENST00000427891 FKBP8Q14318 412 aa10.77□□□□□ -0.68
RLIMP2-201ENST00000427891 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
RLIMP2-201ENST00000427891 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
RLIMP2-201ENST00000427891 DCBLD2Q96PD2 775 aa10.67□□□□□ -0.7
RLIMP2-201ENST00000427891 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
RLIMP2-201ENST00000427891 POTEMA6NI47 508 aa10.63□□□□□ -0.71
RLIMP2-201ENST00000427891 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
RLIMP2-201ENST00000427891 MIER1Q8N108 512 aa10.62□□□□□ -0.71
RLIMP2-201ENST00000427891 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
RLIMP2-201ENST00000427891 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
RLIMP2-201ENST00000427891 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
RLIMP2-201ENST00000427891 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
RLIMP2-201ENST00000427891 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms