RNA–Protein interactions for RNA: ENST00000540997.2

AC138393.1-206, humanhuman

BASIC

Gene AC138393.1, Length 1,886 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138393.1-206ENST00000540997 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
AC138393.1-206ENST00000540997 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
AC138393.1-206ENST00000540997 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
AC138393.1-206ENST00000540997 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.27
AC138393.1-206ENST00000540997 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
AC138393.1-206ENST00000540997 FOXD1Q16676 465 aa15.49■□□□□ 0.07
AC138393.1-206ENST00000540997 ADRA2BP18089 450 aa15.23■□□□□ 0.03
AC138393.1-206ENST00000540997 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
AC138393.1-206ENST00000540997 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
AC138393.1-206ENST00000540997 KCNA4P22459 653 aa14.46□□□□□ -0.1
AC138393.1-206ENST00000540997 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
AC138393.1-206ENST00000540997 MSH5O43196 834 aa14.15□□□□□ -0.14
AC138393.1-206ENST00000540997 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
AC138393.1-206ENST00000540997 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
AC138393.1-206ENST00000540997 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
AC138393.1-206ENST00000540997 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
AC138393.1-206ENST00000540997 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
AC138393.1-206ENST00000540997 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
AC138393.1-206ENST00000540997 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
AC138393.1-206ENST00000540997 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
AC138393.1-206ENST00000540997 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
AC138393.1-206ENST00000540997 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
AC138393.1-206ENST00000540997 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
AC138393.1-206ENST00000540997 ZBTB22O15209 634 aa13.31□□□□□ -0.28
AC138393.1-206ENST00000540997 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
AC138393.1-206ENST00000540997 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
AC138393.1-206ENST00000540997 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
AC138393.1-206ENST00000540997 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
AC138393.1-206ENST00000540997 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
AC138393.1-206ENST00000540997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
AC138393.1-206ENST00000540997 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
AC138393.1-206ENST00000540997 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
AC138393.1-206ENST00000540997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
AC138393.1-206ENST00000540997 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
AC138393.1-206ENST00000540997 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
AC138393.1-206ENST00000540997 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
AC138393.1-206ENST00000540997 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
AC138393.1-206ENST00000540997 APLP2Q06481 763 aa12.31□□□□□ -0.44
AC138393.1-206ENST00000540997 FKBP8Q14318 412 aa12.25□□□□□ -0.45
AC138393.1-206ENST00000540997 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.46
AC138393.1-206ENST00000540997 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
AC138393.1-206ENST00000540997 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
AC138393.1-206ENST00000540997 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
AC138393.1-206ENST00000540997 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
AC138393.1-206ENST00000540997 CAPN15O75808 1086 aa12.02□□□□□ -0.49
AC138393.1-206ENST00000540997 POLA2Q14181 598 aa11.93□□□□□ -0.5
AC138393.1-206ENST00000540997 FBLN2P98095 1184 aa11.91□□□□□ -0.5
AC138393.1-206ENST00000540997 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
AC138393.1-206ENST00000540997 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
AC138393.1-206ENST00000540997 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
AC138393.1-206ENST00000540997 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
AC138393.1-206ENST00000540997 ABCB7O75027 752 aa11.82□□□□□ -0.52
AC138393.1-206ENST00000540997 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
AC138393.1-206ENST00000540997 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
AC138393.1-206ENST00000540997 PROM2Q8N271 834 aa11.7□□□□□ -0.54
AC138393.1-206ENST00000540997 DSG3P32926 999 aa11.7□□□□□ -0.54
AC138393.1-206ENST00000540997 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
AC138393.1-206ENST00000540997 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
AC138393.1-206ENST00000540997 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
AC138393.1-206ENST00000540997 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
AC138393.1-206ENST00000540997 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
AC138393.1-206ENST00000540997 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
AC138393.1-206ENST00000540997 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
AC138393.1-206ENST00000540997 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
AC138393.1-206ENST00000540997 IFNLR1Q8IU57 520 aaPredicted RBP11.39□□□□□ -0.59
AC138393.1-206ENST00000540997 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
AC138393.1-206ENST00000540997 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
AC138393.1-206ENST00000540997 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
AC138393.1-206ENST00000540997 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
AC138393.1-206ENST00000540997 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
AC138393.1-206ENST00000540997 SPOCK2Q92563 424 aa11.21□□□□□ -0.62
AC138393.1-206ENST00000540997 MIER1Q8N108 512 aa11.19□□□□□ -0.62
AC138393.1-206ENST00000540997 PKD2Q13563 968 aa11.17□□□□□ -0.62
AC138393.1-206ENST00000540997 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
AC138393.1-206ENST00000540997 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
AC138393.1-206ENST00000540997 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
AC138393.1-206ENST00000540997 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
AC138393.1-206ENST00000540997 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
AC138393.1-206ENST00000540997 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
AC138393.1-206ENST00000540997 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
AC138393.1-206ENST00000540997 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
AC138393.1-206ENST00000540997 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
AC138393.1-206ENST00000540997 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
AC138393.1-206ENST00000540997 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
AC138393.1-206ENST00000540997 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
AC138393.1-206ENST00000540997 RGL2O15211 777 aa10.91□□□□□ -0.66
AC138393.1-206ENST00000540997 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
AC138393.1-206ENST00000540997 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
AC138393.1-206ENST00000540997 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
AC138393.1-206ENST00000540997 GSE1Q14687 1217 aa10.86□□□□□ -0.67
AC138393.1-206ENST00000540997 NUBP1P53384 320 aa10.85□□□□□ -0.67
AC138393.1-206ENST00000540997 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
AC138393.1-206ENST00000540997 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
AC138393.1-206ENST00000540997 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
AC138393.1-206ENST00000540997 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
AC138393.1-206ENST00000540997 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
AC138393.1-206ENST00000540997 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
AC138393.1-206ENST00000540997 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
AC138393.1-206ENST00000540997 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
AC138393.1-206ENST00000540997 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms